Transcript Search Help

Seach target	Description	Example
Transcript Sequence Search
Prediction method	Select prediction method.	AUGUSTUS(fixed)
Transctipt ID	Input Transctip ID.(partial-word search)	Le_g1.t1 or Le g1 = gene00001 t1 = transcript00001
Transcript Length	Input length of Transcript sequences.(min max)	min:100 max:200
Blast result Seach
Desctiption	Input desctiption of hit protein in BLAST reslt.(partial-word search)	predicted protein
Accession	Input accession of hit protein in BLAST reslt.(partial-word search)	YP_001734508
E-value	Input max E-value.	1E-3 or 0.000000001
Identities	Input min identites(%).	90
Alignment rate	Input min alignment rate(%).	90
Kegg pathway Search
Species	Input species name of hit pathway.(partial-word search)	mmu
Map id	Input KEGG map id.(partial-word search)	470
Name	Input KEGG pathway name.(partial-word search)	Metabolic
GO Search
GO id	Input GO id of hit protein.(partial-word search)	[GO: GO:0005524] ---< 5524
Term	Input GO term of hit protein.(partial-word search)	NA binding
Pfam result Search
Desctiption	Input desctiption of pfam hit protein.(partial-word search)	kinase
E-Value	Input max E-value.	1E-5 or 0.00005